EDP Sciences logo
Subscriber Authentication Point
Search
Menu
Home All issues Volume 41 / No 6-7 (Juin-Juillet 2025) Med Sci (Paris), 41 6-7 (2025) 585-592 References
Open Access
Issue
Med Sci (Paris)
Volume 41, Number 6-7, Juin-Juillet 2025
Page(s) 585 - 592
Section Repères
DOI https://doi.org/10.1051/medsci/2025083
Published online 07 July 2025
  1. Kilaru P, Hill D, Anderson K, et al. Wastewater Surveillance for Infectious Disease: A Systematic Review. Am J Epidemiol 2023; 192 : 305–22. [CrossRef] [Google Scholar]
  2. Zuccato E, Chiabrando C, Castiglioni S, et al. Estimating community drug abuse by wastewater analysis. Environ Health Perspect 2008; 116 : 1027–32. [CrossRef] [PubMed] [Google Scholar]
  3. Paul JR, Trask JD, Culotta CS. Poliomyelitic virus in sewage. Science 1939; 90 : 258–9. [CrossRef] [PubMed] [Google Scholar]
  4. Melnick JL. Poliomyelitis virus in urban sewage in epidemic and in nonepidemic times. Am J Hyg 1947; 45 : 240–53. [Google Scholar]
  5. Elkana Y, Manaa A, Marzouk Y, et al. Detection of hepatitis A virus in sewage. J Virol Methods 1983; 7 : 259–62. [CrossRef] [PubMed] [Google Scholar]
  6. Steinmann J. Detection of rotavirus in sewage. Appl Environ Microbiol 1981; 41 : 1043–5. [CrossRef] [Google Scholar]
  7. Ahmed W, Bertsch PM, Bivins A, et al. Comparison of virus concentration methods for the RT-qPCR-based recovery of murine hepatitis virus, a surrogate for SARS-CoV-2 from untreated wastewater. Sci Total Environ 2020; 739 : 139960. [CrossRef] [PubMed] [Google Scholar]
  8. Courjon J, Contenti J, Demonchy E, et al. COVID-19 patients age, comorbidity profiles and clinical presentation related to the SARS-CoV-2 UK-variant spread in the Southeast of France. Sci Rep 2021; 11 : 18456. [CrossRef] [PubMed] [Google Scholar]
  9. Pettit SD, Jerome KR, Rouquie D, et al. ‘All In’: a pragmatic framework for COVID-19 testing and action on a global scale. EMBO Mol Med 2020; 12 : e12634. [CrossRef] [Google Scholar]
  10. Smyth DS, Trujillo M, Gregory DA, et al. Tracking cryptic SARS-CoV-2 lineages detected in NYC wastewater. Nat Commun 2022; 13 : 635. [CrossRef] [PubMed] [Google Scholar]
  11. Tierney BT, Foox J, Ryon KA, et al. Towards geospatially-resolved public-health surveillance via wastewater sequencing. Nat Commun 2024; 15 : 8386. [CrossRef] [PubMed] [Google Scholar]
  12. Child HT, Airey G, Maloney DM, et al. Comparison of metagenomic and targeted methods for sequencing human pathogenic viruses from wastewater. mBio 2023; 14 : e0146823. [CrossRef] [PubMed] [Google Scholar]
  13. Mac Mahon J, Criado Monleon AJ, Gill LW, et al. Wastewater-based epidemiology (WBE) for SARS-CoV-2 — A review focussing on the significance of the sewer network using a Dublin city catchment case study. Water Sci Technol 2022; 86 : 1402–25. [CrossRef] [PubMed] [Google Scholar]
  14. Ahmed W, Bivins A, Bertsch PM, et al. Intraday variability of indicator and pathogenic viruses in 1-h and 24-h composite wastewater samples: Implications for wastewater-based epidemiology. Environ Res 2021; 193 : 110531. [CrossRef] [PubMed] [Google Scholar]
  15. Corpuz MVA, Buonerba A, Vigliotta G, et al. Viruses in wastewater: occurrence, abundance and detection methods. Sci Total Environ 2020; 745 : 140910. [CrossRef] [PubMed] [Google Scholar]
  16. Kitajima M, Ahmed W, Bibby K, et al. SARS-CoV-2 in wastewater: State of the knowledge and research needs. Sci Total Environ 2020; 739 : 139076. [CrossRef] [PubMed] [Google Scholar]
  17. Pina S, Jofre J, Emerson SU, et al. Characterization of a strain of infectious hepatitis E virus isolated from sewage in an area where hepatitis E is not endemic. Appl Environ Microbiol 1998; 64 : 4485–8. [CrossRef] [Google Scholar]
  18. Ye Y, Ellenberg RM, Graham KE, Wigginton KR. Survivability, Partitioning, and Recovery of Enveloped Viruses in Untreated Municipal Wastewater. Environ Sci Technol 2016; 50 : 5077–85. [CrossRef] [PubMed] [Google Scholar]
  19. Rios G, Lacoux C, Leclercq V, et al. Monitoring SARS-CoV-2 variants alterations in Nice neighborhoods by wastewater nanopore sequencing. Lancet Reg Health Eur 2021; 10 : 100202. [CrossRef] [PubMed] [Google Scholar]
  20. Treagus S, Lowther J, Longdon B, et al. Metabarcoding of Hepatitis E Virus Genotype 3 and Norovirus GII from Wastewater Samples in England Using Nanopore Sequencing. Food Environ Virol 2023; 15 : 292–306. [CrossRef] [PubMed] [Google Scholar]
  21. Wurtzer S, Marechal V, Mouchel JM, et al. Evaluation of lockdown effect on SARS-CoV-2 dynamics through viral genome quantification in waste water, Greater Paris, France, 5 March to 23 April 2020. Euro Surveill 2020; 25. [Google Scholar]
  22. Sherchan SP, Solomon T, Idris O, et al. Wastewater surveillance of Mpox virus in Baltimore. Sci Total Environ 2023; 891 : 164414. [CrossRef] [PubMed] [Google Scholar]
  23. Wang T, Wang C, Myshkevych Y, et al. SARS-CoV-2 wastewater-based epidemiology in an enclosed compound: A 2.5-year survey to identify factors contributing to local community dissemination. Sci Total Environ 2023; 875 : 162466. [CrossRef] [PubMed] [Google Scholar]
  24. Cashdollar JL, Wymer L. Methods for primary concentration of viruses from water samples: a review and meta-analysis of recent studies. J Appl Microbiol 2013; 115 : 1–11. [CrossRef] [PubMed] [Google Scholar]
  25. Michen B, Graule T. Isoelectric points of viruses. J Appl Microbiol 2010; 109 : 388–97. [CrossRef] [PubMed] [Google Scholar]
  26. Mondal S, Feirer N, Brockman M, et al. A direct capture method for purification and detection of viral nucleic acid enables epidemiological surveillance of SARS-CoV-2. Sci Total Environ 2021; 795 : 148834. [CrossRef] [PubMed] [Google Scholar]
  27. Vigil K, D’Souza N, Bazner J, et al. Long-term monitoring of SARS-CoV-2 variants in wastewater using a coordinated workflow of droplet digital PCR and nanopore sequencing. Water Res 2024; 254 : 121338. [CrossRef] [PubMed] [Google Scholar]
  28. Rouchka EC, Chariker JH, Saurabh K, et al. The Rapid Assessment of Aggregated Wastewater Samples for Genomic Surveillance of SARS-CoV-2 on a City-Wide Scale. Pathogens 2021; 10. [PubMed] [Google Scholar]
  29. Perez-Cataluna A, Cuevas-Ferrando E, Randazzo W, et al. Comparing analytical methods to detect SARS-CoV-2 in wastewater. Sci Total Environ 2021; 758 : 143870. [CrossRef] [PubMed] [Google Scholar]
  30. Atha DH, Ingham KC. Mechanism of precipitation of proteins by polyethylene glycols. Analysis in terms of excluded volume. Journal of Biological Chemistry 1981; 256 : 12108–17. [CrossRef] [Google Scholar]
  31. Toribio-Avedillo D, Gomez-Gomez C, Sala-Comorera L, et al. Monitoring influenza and respiratory syncytial virus in wastewater. Beyond COVID-19. Sci Total Environ 2023; 892 : 164495. [CrossRef] [PubMed] [Google Scholar]
  32. Boogaerts T, Van Wichelen N, Quireyns M, et al. Current state and future perspectives on de facto population markers for normalization in wastewater-based epidemiology: A systematic literature review. Sci Total Environ 2024; 935 : 173223. [CrossRef] [PubMed] [Google Scholar]
  33. Hsu SY, Bayati M, Li C, et al. Biomarkers selection for population normalization in SARS-CoV-2 wastewater-based epidemiology. Water Res 2022; 223 : 118985. [CrossRef] [PubMed] [Google Scholar]
  34. Been F, Rossi L, Ort C, et al. Population normalization with ammonium in wastewater-based epidemiology: application to illicit drug monitoring. Environ Sci Technol 2014; 48 : 8162–9. [CrossRef] [PubMed] [Google Scholar]
  35. Qiu Y, Yu J, Pabbaraju K, et al. Validating and optimizing the method for molecular detection and quantification of SARS-CoV-2 in wastewater. Sci Total Environ 2022; 812 : 151434. [CrossRef] [PubMed] [Google Scholar]
  36. Wurtz N, Revol O, Jardot P, et al. Monitoring the Circulation of SARS-CoV-2 Variants by Genomic Analysis of Wastewater in Marseille, South-East France. Pathogens 2021; 10. [PubMed] [Google Scholar]
  37. Garcia-Pedemonte D, Carcereny A, Gregori J, et al. Comparison of Nanopore and Synthesis-Based Next-Generation Sequencing Platforms for SARS-CoV-2 Variant Monitoring in Wastewater. Int J Mol Sci 2023; 24. [PubMed] [Google Scholar]
  38. Karthikeyan S, Levy JI, De Hoff P, et al. Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission. Nature 2022; 609 : 101–8. [CrossRef] [PubMed] [Google Scholar]
  39. Wilm A, Aw PP, Bertrand D, et al. LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets. Nucleic Acids Res 2012; 40 : 11189–201. [CrossRef] [PubMed] [Google Scholar]
  40. Grubaugh ND, Gangavarapu K, Quick J, et al. An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar. Genome Biol 2019; 20 : 8. [CrossRef] [PubMed] [Google Scholar]
  41. Caen O, Nizard P, Garrigou S, et al. PCR digitale en micro-compartiments - II. Apport pour la détection quantitative d’ADN tumoral circulant. Med Sci (Paris) 2015 ; 31 : 180–6. [CrossRef] [EDP Sciences] [PubMed] [Google Scholar]
  42. Tisza M, Javornik Cregeen S, Avadhanula V, et al. Wastewater sequencing reveals community and variant dynamics of the collective human virome. Nat Commun 2023; 14 : 6878. [CrossRef] [PubMed] [Google Scholar]
  43. Smith MF, Maqsood R, Sullins RA, et al. Seasonality of respiratory, enteric, and urinary viruses revealed by wastewater genomic surveillance. mSphere 2024; 9 : e0010524. [CrossRef] [PubMed] [Google Scholar]
  44. Michael-Kordatou I, Karaolia P, Fatta-Kassinos D. Sewage analysis as a tool for the COVID-19 pandemic response and management: the urgent need for optimised protocols for SARS-CoV-2 detection and quantification. J Environ Chem Eng 2020; 8 : 104306. [CrossRef] [PubMed] [Google Scholar]
  45. Berchenko Y, Manor Y, Freedman LS, et al. Estimation of polio infection prevalence from environmental surveillance data. Sci Transl Med 2017; 9. [Google Scholar]
  46. Kumar M, Patel AK, Shah AV, et al. First proof of the capability of wastewater surveillance for COVID-19 in India through detection of genetic material of SARS-CoV-2. Sci Total Environ 2020; 746 : 141326. [CrossRef] [PubMed] [Google Scholar]
  47. Hellmér M, Paxéus N, Magnius L, et al. Detection of pathogenic viruses in sewage provided early warnings of hepatitis A virus and norovirus outbreaks. Appl Environ Microbiol 2014; 80 : 6771–81. [CrossRef] [Google Scholar]
  48. Li J, Hosegood I, Powell D, et al. A global aircraft-based wastewater genomic surveillance network for early warning of future pandemics. Lancet Glob Health 2023; 11 : e791–e5. [CrossRef] [PubMed] [Google Scholar]
  49. Le Targa L, Wurtz N, Lacoste A, et al. SARS-CoV-2 testing of aircraft wastewater shows that mandatory tests and vaccination pass before boarding did not prevent massive importation of omicron variant into Europe. Viruses 2022; 14. [PubMed] [Google Scholar]

Current usage metrics show cumulative count of Article Views (full-text article views including HTML views, PDF and ePub downloads, according to the available data) and Abstracts Views on Vision4Press platform.

Data correspond to usage on the plateform after 2015. The current usage metrics is available 48-96 hours after online publication and is updated daily on week days.

Initial download of the metrics may take a while.