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Home All issues Volume 31 / No 3 (Mars 2015) Med Sci (Paris), 31 3 (2015) 282-290 References
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Issue
Med Sci (Paris)
Volume 31, Number 3, Mars 2015
Page(s) 282 - 290
Section M/S Revues
DOI https://doi.org/10.1051/medsci/20153103014
Published online 08 April 2015
  1. Romby P, Marzi S, Westhof E. La structure atomique du ribosome en pleine lumière. Med Sci (Paris) 2009 ; 25 : 977–981. [CrossRef] [EDP Sciences] [PubMed] [Google Scholar]
  2. Gillet R, Felden B. Lost in translation : le déblocage des ribosomes bactériens par le mécanisme de trans-traduction. Med Sci (Paris) 2007 ; 23 : 633–639. [CrossRef] [EDP Sciences] [PubMed] [Google Scholar]
  3. Schmeing TM, Ramakrishnan V. What recent ribosome structures have revealed about the mechanism of translation. Nature 2009 ; 461 : 1234–1242. [CrossRef] [PubMed] [Google Scholar]
  4. Zaher HS, Green R. Quality control by the ribosome following peptide bond formation. Nature 2009 ; 457 : 161–166. [CrossRef] [PubMed] [Google Scholar]
  5. Wilson DN. Less is more for leaderless mRNA translation. Mol Cell 2009 ; 33 : 141–142. [CrossRef] [PubMed] [Google Scholar]
  6. Kane JF. Effects of rare codon clusters on high-level expression of heterologous proteins in Escherichia coli. Curr Opin Biotechnol 1995 ; 6 : 494–500. [CrossRef] [PubMed] [Google Scholar]
  7. Neubauer C, Gillet R, Kelley AC, Ramakrishnan V. Decoding in the absence of a codon by tmRNA and SmpB in the ribosome. Science 2012 ; 335 : 1366–1369. [CrossRef] [PubMed] [Google Scholar]
  8. Weis F, Bron P, Giudice E, et al. tmRNA-SmpB: a journey to the centre of the bacterial ribosome. EMBO J 2010 ; 29 : 3810–3818. [CrossRef] [PubMed] [Google Scholar]
  9. Weis F, Bron P, Rolland JP, et al. Accommodation of tmRNA-SmpB into stalled ribosomes: a cryo-EM study. RNA 2010 ; 16 : 299–306. [CrossRef] [PubMed] [Google Scholar]
  10. Giudice E, Mace K, Gillet R. Trans-translation exposed: understanding the structures and functions of tmRNA-SmpB. Front Microbiol 2014 ; 5 : 113. [CrossRef] [PubMed] [Google Scholar]
  11. Ito K, Chadani Y, Nakamori K, et al. Nascentome analysis uncovers futile protein synthesis in Escherichia coli. PLoS One 2011 ; 6 : e28413. [CrossRef] [PubMed] [Google Scholar]
  12. Moore SD, Sauer RT. Ribosome rescue: tmRNA tagging activity and capacity in Escherichia coli. Mol Microbiol 2005 ; 58 : 456–466. [CrossRef] [PubMed] [Google Scholar]
  13. Graille M, Seraphin B. Surveillance pathways rescuing eukaryotic ribosomes lost in translation. Nat Rev Mol Cell Biol 2012 ; 13 : 727–735. [CrossRef] [PubMed] [Google Scholar]
  14. Inada T. Quality control systems for aberrant mRNAs induced by aberrant translation elongation and termination. Biochim Biophys Acta 2013 ; 1829 : 634–642. [CrossRef] [PubMed] [Google Scholar]
  15. Shimizu Y. ArfA recruits RF2 into stalled ribosomes. J Mol Biol 2012 ; 423 : 624–631. [CrossRef] [PubMed] [Google Scholar]
  16. Schaub RE, Poole SJ, Garza-Sanchez F, et al. Proteobacterial ArfA peptides are synthesized from non-stop messenger RNAs. J Biol Chem 2012 ; 287 : 29765–29775. [CrossRef] [PubMed] [Google Scholar]
  17. Hayes CS, Keiler KC. Beyond ribosome rescue: tmRNA and co-translational processes. FEBS Lett 2010 ; 584 : 413–419. [CrossRef] [PubMed] [Google Scholar]
  18. Handa Y, Inaho N, Nameki N. YaeJ is a novel ribosome-associated protein in Escherichia coli that can hydrolyze peptidyl-tRNA on stalled ribosomes. Nucleic Acids Res 2011 ; 39 : 1739–1748. [CrossRef] [PubMed] [Google Scholar]
  19. Gagnon MG, Seetharaman SV, Bulkley D, Steitz TA. Structural basis for the rescue of stalled ribosomes: structure of YaeJ bound to the ribosome. Science 2012 ; 335 : 1370–1372. [CrossRef] [PubMed] [Google Scholar]
  20. Keiler KC, Feaga HA. Resolving nonstop translation complexes is a matter of life or death. J Bacteriol 2014 ; 196 : 2123–2130. [CrossRef] [PubMed] [Google Scholar]
  21. Pech M, Karim Z, Yamamoto H, et al. Elongation factor 4 (EF4/LepA) accelerates protein synthesis at increased Mg2+ concentrations. Proc Natl Acad Sci USA 2011 ; 108 : 3199–3203. [CrossRef] [Google Scholar]
  22. Doerfel LK, Wohlgemuth I, Kothe C, et al. EF-P is essential for rapid synthesis of proteins containing consecutive proline residues. Science 2013 ; 339 : 85–88. [CrossRef] [PubMed] [Google Scholar]
  23. Ude S, Lassak J, Starosta AL, et al. Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches. Science 2013 ; 339 : 82–85. [CrossRef] [PubMed] [Google Scholar]
  24. Vivanco-Dominguez S, Bueno-Martinez J, Leon-Avila G, et al. Protein synthesis factors (RF1, RF2, RF3, RRF, and tmRNA) and peptidyl-tRNA hydrolase rescue stalled ribosomes at sense codons. J Mol Biol 2012 ; 417 : 425–439. [CrossRef] [PubMed] [Google Scholar]
  25. Ferbitz L, Maier T, Patzelt H, et al. Trigger factor in complex with the ribosome forms a molecular cradle for nascent proteins. Nature 2004 ; 431 : 590–596. [CrossRef] [PubMed] [Google Scholar]
  26. Wendrich TM, Blaha G, Wilson DN, et al. Dissection of the mechanism for the stringent factor RelA. Mol Cell 2002 ; 10 : 779–788. [CrossRef] [PubMed] [Google Scholar]
  27. Gerdes K, Christensen SK, Lobner-Olesen A. Prokaryotic toxin-antitoxin stress response loci. Nat Rev Microbiol 2005 ; 3 : 371–382. [CrossRef] [PubMed] [Google Scholar]
  28. Christensen SK, Pedersen K, Hansen FG, Gerdes K. Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA. J Mol Biol 2003 ; 332 : 809–819. [CrossRef] [PubMed] [Google Scholar]
  29. Pedersen K, Zavialov AV, Pavlov MY, et al. The bacterial toxin RelE displays codon-specific cleavage of mRNAs in the ribosomal A site. Cell 2003 ; 112 : 131–140. [CrossRef] [PubMed] [Google Scholar]
  30. Giudice E, Gillet R. The task force that rescues stalled ribosomes in bacteria. Trends Biochem Sci 2013 ; 38 : 403–411. [CrossRef] [PubMed] [Google Scholar]
  31. Ramadoss NS, Zhou X, Keiler KC. tmRNA is essential in Shigella flexneri. PLoS One 2013 ; 8 : e57537. [CrossRef] [PubMed] [Google Scholar]
  32. Huang C, Wolfgang MC, Withey J, et al. Charged tmRNA but not tmRNA-mediated proteolysis is essential for Neisseria gonorrhoeae viability. EMBO J 2000 ; 19 : 1098–1107. [CrossRef] [PubMed] [Google Scholar]
  33. Keiler KC, Alumasa JN. The potential of trans-translation inhibitors as antibiotics. Future Microbiol 2013 ; 8 : 1235–1237. [CrossRef] [PubMed] [Google Scholar]
  34. De la Cruz J, Vioque A. Increased sensitivity to protein synthesis inhibitors in cells lacking tmRNA. RNA 2001 ; 7 : 1708–1716. [PubMed] [Google Scholar]
  35. Vioque A, De la Cruz J. Trans-translation and protein synthesis inhibitors. FEMS Microbiol Lett 2003 ; 218 : 9–14. [CrossRef] [PubMed] [Google Scholar]
  36. Andini N, Nash KA. Expression of tmRNA in mycobacteria is increased by antimicrobial agents that target the ribosome. FEMS Microbiol Lett 2011 ; 322 : 172–179. [CrossRef] [PubMed] [Google Scholar]
  37. Cole ST. Microbiology. Pyrazinamide-old TB drug finds new target. Science 2011 ; 333 : 1583–1584. [CrossRef] [PubMed] [Google Scholar]
  38. Shi W, Zhang X, Jiang X, et al. Pyrazinamide inhibits trans-translation in Mycobacterium tuberculosis. Science 2011 ; 333 : 1630–1632. [CrossRef] [PubMed] [Google Scholar]
  39. Ramadoss NS, Alumasa JN, Cheng L, et al. Small molecule inhibitors of trans-translation have broad-spectrum antibiotic activity. Proc Natl Acad Sci USA 2013 ; 110 : 10282–10287. [CrossRef] [Google Scholar]
  40. Okan NA, Mena P, Benach JL, et al. The smpB-ssrA mutant of Yersinia pestis functions as a live attenuated vaccine to protect mice against pulmonary plague infection. Infect Immun 2010 ; 78 : 1284–1293. [CrossRef] [PubMed] [Google Scholar]
  41. Zhang J, van Aartsen JJ, Jiang X, et al. Expansion of the known Klebsiella pneumoniae species gene pool by characterization of novel alien DNA islands integrated into tmRNA gene sites. J Microbiol Methods 2011 ; 84 : 283–289. [CrossRef] [PubMed] [Google Scholar]
  42. Wernecke M, Mullen C, Sharma V, et al. Evaluation of a novel real-time PCR test based on the ssrA gene for the identification of group B streptococci in vaginal swabs. BMC Infect Dis 2009 ; 9 : 148. [CrossRef] [PubMed] [Google Scholar]
  43. O’Grady J, Sedano-Balbas S, Maher M, et al. Rapid real-time PCR detection of Listeria monocytogenes in enriched food samples based on the ssrA gene, a novel diagnostic target. Food Microbiol 2008; 25 : 75–84. [CrossRef] [PubMed] [Google Scholar]

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