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Accueil Tous les numéros Volume 29 / Numéro 5 (Mai 2013) Med Sci (Paris), 29 5 (2013) 501-508 Références
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Numéro
Med Sci (Paris)
Volume 29, Numéro 5, Mai 2013
Page(s) 501 - 508
Section M/S Revues
DOI https://doi.org/10.1051/medsci/2013295013
Publié en ligne 28 mai 2013
  1. Handelsman J, Rondon MR, Brady SF, et al. Molecular biological access to the chemistry of unknown soil microbes: A new frontier for natural products. Chem Biol 1998 ; 5 : R245–R249. [CrossRef] [PubMed] [Google Scholar]
  2. Schmidt TM, Delong EF, Pace NR. Analysis of a marine picoplankton community by 16S ribosomal-RNA gene cloning and sequencing. J Bacteriol 1991 ; 173 : 4371–4378. [PubMed] [Google Scholar]
  3. Pace NR, Stahl DA, Lane DJ, et al. Analyzing natural microbial populations by rRNA sequences. ASM News 1985 ; 51 : 4–12. [Google Scholar]
  4. Pace NR. A molecular view of microbial diversity and the biosphere. Science 1997 ; 276 : 734–740. [CrossRef] [PubMed] [Google Scholar]
  5. Amann RI, Ludwig W, Schleifer KH. Phylogenetic identification and in-situ detection of individual microbial-cells without cultivation. Microbiol Rev 1995 ; 59 : 143–169. [Google Scholar]
  6. Venter JC, Remington K, Heidelberg JF, et al. Environmental genome shotgun sequencing of the Sargasso Sea. Science 2004 ; 304 : 66–74. [CrossRef] [PubMed] [Google Scholar]
  7. Allander T, Emerson SU, Engle RE, et al. A virus discovery method incorporating DNase treatment and its application to the identification of two bovine parvovirus species. Proc Natl Acad Sci USA 2001 ; 98 : 11609–11614. [CrossRef] [Google Scholar]
  8. Breitbart M, Salamon P, Andresen B, et al. Genomic analysis of uncultured marine viral communities. Proc Natl Acad Sci USA 2002 ; 99 : 14250–14255. [CrossRef] [Google Scholar]
  9. Rosario K, Breitbart M. Exploring the viral world through metagenomics. Curr Opin Virol 2011 ; 1 : 1–9. [CrossRef] [Google Scholar]
  10. Djikeng A, Kuzmickas R, Anderson NG, et al. Metagenomic analysis of RNA viruses in a fresh water lake. PLoS One 2009 ; 4 : e38499. [CrossRef] [Google Scholar]
  11. Delong EF, Preston CM, Mincer T, et al. Community genomics among stratified microbial assemblages in the ocean’s interior. Science 2006 ; 311 : 496–503. [CrossRef] [PubMed] [Google Scholar]
  12. Dupré J, O’Malley MA. Metagenomics and biological ontology. Stud Hist Philos Biol Biomed Sci 2007 ; 38 : 834–846. [CrossRef] [PubMed] [Google Scholar]
  13. Methe BA, Nelson KE, Pop M, et al. A framework for human microbiome research. Nature 2012 ; 486 : 215–221. [CrossRef] [PubMed] [Google Scholar]
  14. Faust K, Sathirapongsasuti JF, Izard J, et al. Microbial co-occurrence relationships in the human microbiome. PLoS Comput Biol 2012 ; 8 : e1002606. [CrossRef] [PubMed] [Google Scholar]
  15. Dupré J. Emerging sciences and new conceptions of disease; or, beyond the monogenomic differentiated cell lineage. Euro J Phil Sci 20121 ; 1 : 119–131. [CrossRef] [Google Scholar]
  16. Lai YP, Di Nardo A, Nakatsuji T, et al. Commensal bacteria regulate Toll-like receptor 3-dependent inflammation after skin injury. Nat Med 2009 ; 15 : 1377–1384. [Google Scholar]
  17. Feng HC, Shuda M, Chang Y, et al. Clonal integration of a polyomavirus in human Merkel cell carcinoma. Science 2008 ; 319 : 1096–1100. [CrossRef] [PubMed] [Google Scholar]
  18. Phan TG, Kapusinszky B, Wang CL, et al. The fecal viral flora of wild rodents. PLoS Pathog 2011 ; 7 : e1002218. [CrossRef] [PubMed] [Google Scholar]
  19. Sauvage V, Le Gouil M, Cheval J, et al. A member of a new Picornaviridae genus is shed in pig feces. Int J Infect Diseases 2012 ; 16 : E456. [CrossRef] [Google Scholar]
  20. Sauvage V, Foulongne V, Cheval J, et al. Human polyomavirus related to African green monkey lymphotropic polyomavirus. Emerg Infect Dis 2011 ; 17 : 1364–1370. [PubMed] [Google Scholar]
  21. Sauvage V, Cheval J, Foulongne V, et al. Identification of the first human Gyrovirus, a virus related to chicken anemia virus. J Virol 2011 ; 85 : 7948–7950. [CrossRef] [PubMed] [Google Scholar]
  22. Willner D, Furlan M, Haynes M, et al. Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis, non-cystic fibrosis individuals. PLoS One 2009 ; 4 : e7370. [CrossRef] [PubMed] [Google Scholar]
  23. Foulongne V, Sauvage V, Hebert C, et al. Human skin microbiota: high diversity of DNA viruses identified on the human skin by high throughput sequencing. PLoS One 2012 ; 7 : e38499. [CrossRef] [PubMed] [Google Scholar]
  24. Hoffmann B, Scheuch M, Hoper D, et al. Novel Orthobunyavirus in cattle, Europe, 2011. Emerg Infect Dis 2012 ; 18 : 469–472. [CrossRef] [PubMed] [Google Scholar]
  25. Honkavuori KS, Shivaprasad HL, Briese T, et al. Novel Picornavirus in turkey poults with hepatitis, California, USA. Emerg Infect Dis 2011 ; 17 : 480–487. [CrossRef] [PubMed] [Google Scholar]
  26. Lauck M, Hyeroba D, Tumukunde A, et al. Novel, divergent simian hemorrhagic fever viruses in a wild Ugandan red colobus monkey discovered using direct pyrosequencing. PLoS One 2011 ; 6 : e19056. [CrossRef] [PubMed] [Google Scholar]
  27. Mokili JL, Rohwer F, Dutilh BE. Metagenomics and future perspectives in virus discovery. Curr Opin Virol 2012 ; 2 : 63–67. [CrossRef] [PubMed] [Google Scholar]
  28. Van den Brand JMA, van Leeuwen M, Schapendonk CM, et al. Metagenomic analysis of the viral flora of pine marten and European badger feces. J Virol 2012 ; 86 : 2360–2365. [CrossRef] [PubMed] [Google Scholar]
  29. Pybus OG, Suchard MA, Lemey P, et al. Unifying the spatial epidemiology and molecular evolution of emerging epidemics. Proc Natl Acad Sci USA 2012 ; 109 : 15066–15071. [CrossRef] [Google Scholar]
  30. Escobar-Gutierrez A, Vazquez-Pichardo M, Cruz-Rivera M, et al. Identification of hepatitis C virus transmission using a Next-Generation Sequencing approach. J Clin Microbiol 2012 ; 50 : 1461–1463. [CrossRef] [PubMed] [Google Scholar]
  31. Croville G, Soubies SM, Barbieri J, et al. Field monitoring of avian influenza viruses: whole-genome sequencing and tracking of neuraminidase evolution using 454 pyrosequencing. J Clin Microbiol 2012 ; 50 : 2881–2887. [CrossRef] [PubMed] [Google Scholar]
  32. Roossinck MJ, Saha P, Wiley G, et al. Ecogenomics: using massively parallel pyrosequencing to understand virus ecology. Mol Ecol 2010 ; 19 : 81–88. [CrossRef] [PubMed] [Google Scholar]
  33. Duffy S, Shackelton LA, Holmes EC. Rates of evolutionary change in viruses: patterns and determinants. Nat Rev Genet 2008 ; 9 : 267–276. [CrossRef] [PubMed] [Google Scholar]
  34. Beerenwinkel N, Günthard HF, Roth V, et al. Challenges and opportunities in estimating viral genetic diversity from next-generation sequencing data. Front Microbiol 2012 ; 3 : 1–16. [CrossRef] [PubMed] [Google Scholar]
  35. Blinkova O, Kapoor A, Victoria J, et al. Cardioviruses are genetically diverse and cause common enteric infections in South Asian children. J Virol 2009 ; 83 : 4631–4641. [CrossRef] [PubMed] [Google Scholar]
  36. Bull RA, Eden JS, Luciani F, et al. Contribution of intra- and interhost dynamics to Norovirus evolution. J Virol 2012 ; 86 : 3219–3229. [CrossRef] [PubMed] [Google Scholar]
  37. Wright CF, Morelli MJ, Thebaud G, et al. Beyond the consensus: dissecting within-host viral population diversity of foot-and-mouth disease virus by using next-generation genome sequencing. J Virol 2011 ; 85 : 2266–2275. [CrossRef] [PubMed] [Google Scholar]
  38. Nishijima N, Marusawa H, Ueda Y, et al. Dynamics of hepatitis B virus quasispecies in association with nucleos(t)ide analogue treatment determined by ultra-deep sequencing. PLoS One 2012 ; 7 : e35052. [CrossRef] [PubMed] [Google Scholar]
  39. Roossinck MJ. The good viruses: viral mutualistic symbioses. Nat Rev Microbiol 2011 ; 9 : 99–108. [CrossRef] [PubMed] [Google Scholar]
  40. Jordan B. Une révolution longuement attendue. Med Sci (Paris) 2008 ; 24 : 869–873. [CrossRef] [EDP Sciences] [PubMed] [Google Scholar]
  41. Kanitakis J. Carcinome à cellules de Merkel : première implication connue d'un polyomavirus dans la genèse d'un cancer humain. Med Sci (Paris) 2008 ; 24 : 570–571. [CrossRef] [EDP Sciences] [PubMed] [Google Scholar]

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