Accès gratuit
Numéro
Med Sci (Paris)
Volume 21, Numéro 3, Mars 2005
Page(s) 290 - 296
Section M/S revues
DOI https://doi.org/10.1051/medsci/2005213290
Publié en ligne 15 mars 2005
  1. Woese CR. Bacterial evolution. Microbiol Rev 1987; 51 : 221–71.
  2. Stackebrandt E, Goebel BM. Taxonomic note : a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 1994; 44 : 846–9.
  3. Rappé MS, Giovannoni SJ. The uncultured microbial majority. Annual Rev Microbiol 2003; 57 : 369–94.
  4. Dojka MA, Harris JK, Pace NR. Expanding the known diversity and environmental distribution of an uncultured phylogenetic division of bacteria. Appl Environ Microbiol 2000; 4 : 1617–21.
  5. Dauga C. Evolution of the gyrB gene and the molecular phylogeny of Enterobacteriaceae : a model molecule for molecular systematic studies. Int J Syst Evol Microbiol 2002; 52 : 531–47.
  6. Kim BJ, Hong SK, Lee KH, et al. Differential identification of Mycobacterium tuberculosis complex and nontuberculous mycobacteria by duplex PCR assay using the RNA polymerase gene (rpoB). J Clin Microbiol 2004; 42 : 1308–12.
  7. Zeaiter Z, Fournier PE, Ogata H, et al. Phylogenetic classification of Bartonella species by comparing groEL sequences. Int J Syst Evol Microbiol 2002; 52 : 165–71.
  8. Anderson B, Sims K, Regnery R, et al. Detection of Rochalimaea henselae DNA in specimens from cat scratch disease patients by PCR. J Clin Microbiol 1994; 32 : 942–8.
  9. Relman DA, Loutit JS, Schmidt TM, et al. The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens. N Engl J Med 1990; 323 : 1573–80.
  10. Relman DA, Schmidt TM, MacDermott, et al. Identification of the uncultured bacillus of Whipple’s disease. N Engl J Med 1992; 327 : 293–301.
  11. La Scola B, Raoult D. Culture of Bartonella quintana and Bartonella henselae from human samples : a 5-year experience (1993 to 1998). J Clin Microbiol 1999; 37 : 1899–905.
  12. Maiwald M, von Herbay A, Fredricks DN, et al. Cultivation of Tropheryma whipplei from cerebrospinal fluid. J Infect Dis 2003; 188 : 801–8.
  13. Dauga C, Miras I, Grimont PAD. Identification of Bartonella henselae and B. quintana 16S rDNA sequences by branch-, genus-, and species-specific amplification. J Med Microbiol 1996; 45 : 192–9.
  14. Dauga C, Miras I, Grimont PAD. Strategy for detection and identification of bacteria based on 16S rRNA genes in suspected Whipple’s disease. J Med Microbiol 1997; 46 : 340–7.
  15. Coenye T, Goris J, Spilker T, et al. Characterization on unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov. J Clin Microbiol 2002; 40 : 2062–9.
  16. Roussée JM, Bermond D, Piémont Y, et al. Dialister pneumosintes associated with human brain abscesses. J Clin Microbiol 2002; 40 : 3871–73.
  17. Hervio-Heath D, Colwell RR, Derrien A, et al. Occurrence of pathogenic vibrios in coastal areas of France. J Appl Microbiol 2002; 92 : 1123–35.
  18. Pruzzo C, Crippa A, Bertone S, et al. Attachment of Vibrio alginolyticus to chitin mediated by chitin-binding proteins. Microbiology 1996; 142 : 2181–6.
  19. Ballard AL, Fry NK, Chan L, et al. Detection of Legionella pneumophila using a real-time PCR hybridization assay. J Clin Microbiol 2000; 38 : 4215–8.
  20. Hayden RT, Uhl JR, Qian X, et al. Direct detection of Legionella species from bronchoalveolar lavage and open lung biopsy specimens : comparison of LightCycler PCR, in situ hybridization, direct fluorescence antigen detection, and culture. J Clin Microbiol 2001; 39 : 2618–26.
  21. Kessler HH, Reinthaler FF, Pschaid A, et al. Rapid detection of Legionella species in bronchoalveolar lavage fluids with the EnviroAmp Legionella PCR amplification and detection kit. J Clin Microbiol 1993; 31 : 3325–8.
  22. Lindsay DS, Abraham AW, Fallon RJ. Detection of mip gene by PCR for diagnosis of Legionnaires’ disease. J Clin Microbiol 1994; 32 : 3068–9.
  23. Wellinghausen N, Frost C, Marre R. Detection of Legionellae in hospital water samples by quantitative real-time LightCycler PCR. Appl Environ Microbiol 2001; 67 : 3985–93.
  24. Jonas D, Rosenbaum A, Weyrich S, et al. Enzyme-linked immunoassay for detection of PCR-amplified DNA of Legionellae in bronchoalveolar fluid. J Clin Microbiol 1995; 33 : 1247–52.
  25. Cloud JL, Carroll KC, Pixton P, et al. Detection of Legionella species in respiratory specimens using PCR with sequencing confirmation. J Clin Microbiol 2000; 38 : 1709–12.
  26. Calvo-Bado LA, Morgan AJ, Sergeant M, et al. Molecular characterization of Legionella populations present within slow sand filters used for fungal plant pathogen suppression in horticultural crops. Appl Environ Microbiol 2003; 69 : 533–41.
  27. Campese C, Che D. Cluster of legionnaires’ disease cases in northern France, the situation on 18 december 2003. Eurosurveillance Weekly 2003; 7 (http://www.eurosurveillance.org/ew/2003/031218.asp).
  28. Cora LB, Matthias H, Rolf M, et al. The genus Caedibacter comprises endosymbionts of Paramecium spp related to the Rickettsiales (alpha proteobacteria) and to Francisella tularensis (gamma proteobacteria). Appl Environ Microbiol 2002; 68 : 6043–50.
  29. Horn M, Harzenetter MD, Linner T, et al. Members of the Cytophaga-Flavobacterium-Bacteroides phylum as intracellular bacteria of acanthamoebae : proposal of Candidatus Amoebophilus asiaticus. Environ Microbiol 2001; 3 : 440–9.
  30. Fritsche TR, Horn M, Wagner M, et al. Phylogenetic diversity among geographically dispersed Chlamydiales endosymbionts recovered from clinical and environmental isolates of Acanthamoeba spp. Appl Environ Microbiol 2000; 66 : 2613–9.
  31. Amann R, Springer N, Schonhuber W, et al. Obligate intracellular bacterial parasites of Acanthamoebae related to Chlamydia spp. Appl Environ Microbiol 1997; 63 : 115–21.
  32. Horn M, Wagner M, Muller KD, et al. Neochlamydia hartmannellae gen. nov., sp. nov. (Parachlamydiaceae), an endoparasite of the amoeba Hartmannella vermiformis. Microbiology 2000; 146 : 1231–9.
  33. Huber R, Burggraf S, Mayer T, et al. Isolation of a hyperthermophilic archaeum predicted by in situ RNA analysis. Nature 1995; 376 : 57–8.
  34. Rappé MS, Connon SA, Vergin KL, et al. Cultivation of the ubiquitous SAR11 marine bacterioplankton clade. Nature 2002; 418 : 630–3.
  35. Zoetendal EG, Plugge CM, Akkermans AD, et al. Victivallis vadensis gen. nov., sp. nov., a sugar-fermenting anaerobe from human faeces. Int J Syst Evol Microbiol 2003; 53 : 2111–2.
  36. Janssen PH, Yates PS, Grinton BE, et al. Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl Environ Microbiol 2002; 68 : 2391–6.
  37. Joseph SJ, Hugenholtz P, Sangwan P, et al. Laboratory cultivation of widespread and previously uncultured soil bacteria. Appl Environ Microbiol 2003; 69 : 7210–5.
  38. Kaeberlein T, Lewis K, Epstein SS. Isolating « uncultivable » microorganisms in pure culture in a simulated natural environment. Science 2002; 296 : 1127–9.
  39. Venter JC, Remington K, Heidelberg JF, et al. Environmental genome shotgun sequencing of the Sargasso sea. Science 2004; 304 : 66–74.
  40. Henne A, Daniel R, Schmitz RA, Gottschalk G. Construction of environmental DNA libraries in Escherichia coli and screening for the presence of genes conferring utilization of 4-hydroxybutyrate. Appl Environ Microbiol 1999; 65 : 3901–7.
  41. Daniel R. The soil metagenome : a rich resource for the discovery of novel natural products. Curr Opin Biotechnol 2004; 15 : 199–204.
  42. Streit WR, Daniel R, Jaeger KE. Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms. Curr Opin Biotechnol 2004; 15 : 285–90.
  43. Hugenholtz P, Goebel BM, Pace NR. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J Bacteriol 1998; 180 : 4765–74.

Les statistiques affichées correspondent au cumul d'une part des vues des résumés de l'article et d'autre part des vues et téléchargements de l'article plein-texte (PDF, Full-HTML, ePub... selon les formats disponibles) sur la platefome Vision4Press.

Les statistiques sont disponibles avec un délai de 48 à 96 heures et sont mises à jour quotidiennement en semaine.

Le chargement des statistiques peut être long.